Class Central is learner-supported. When you buy through links on our site, we may earn an affiliate commission.

Online Course

Graph Algorithms in Genome Sequencing

University of California, San Diego via edX

Overview

In this course, part of the Algorithms and Data Structures MicroMasters program, you will learn how graph algorithms are used in two fundamental problems in modern biology:

  • How do we sequence a genome?
  • How do we construct an evolutionary “Tree of Life?"

In the first part of the course, you will learn how genome sequencing relies on using a graph to assemble millions of tiny DNA fragments into a contiguous genome. We will then shift gears and learn how to construct an evolutionary tree of life from genome data.

Syllabus

Week 1: Introduction to Genome Sequencing and Graphs
Introduction to the basics of genome sequencing, and first attempts to model this problem using graphs.

Weeks 2 and 3: Assembling Genomes from Tiny Fragments
Applying an Eulerian path approach to assemble a genome from small pieces of DNA, and adapting this theoretical solution to practical considerations.

Taught by

Phillip Compeau and Pavel Pevzner

Reviews

0.0 rating, based on 0 reviews

Start your review of Graph Algorithms in Genome Sequencing

Related Courses

Class Central

Get personalized course recommendations, track subjects and courses with reminders, and more.

Sign up for free

Never stop learning Never Stop Learning!

Get personalized course recommendations, track subjects and courses with reminders, and more.

Sign up for free