This course on genomics aims to teach students how to perform genome assembly and annotation, compare genomes using bioinformatics tools, analyze bacterial genomes, create phylogenetic trees, visualize genomes, identify antimicrobial resistance genes, build phylogenetic trees based on gene sequences, and use Python for data visualization. The teaching method includes tutorials on various bioinformatics tools and software. The course is designed for beginners in bioinformatics who are interested in genomics and genome analysis.
Overview
Syllabus
Bioinformatics for beginners | Course | Genome Assembly and Annotation | llumina Reads | SPAdes.
A bioinformatics tutorial on Genome comparison using BRIG software.
A bioinformatics tutorial on GENOME ASSEMBLY | COMBINING NANOPORE AND ILLUMINA READS.
Bioinformatics for beginners | Course | Genome Assembly and Annotation | Bacterial Genomes | Prokka.
A bioinformatics tutorial on Bacterial Genome Analysis | Comparative Genomics.
Create phylogenetic trees using MUSCLE and PHYML.
CREATE MANHATTAN PLOT OF FST VALUES USING PYTHON.
Bioinformatics for Beginners | Course | Genome visualization using the online CGView tool.
Genome Visualization using Artemis (DNAPlotter) | Bioinformatics for Beginners | Course | Tutorial.
A bioinformatics tutorial on how to identify Antimicrobial Resistance Genes | Abricate | Beginners.
Build Phylogenetic Trees based on Gene Sequences.
How to Build Phylogenetic Trees using RAxML and iTOL | Bioinformatics for Beginners |Tutorial.
Visualize phylogenetic trees using iTOL.
Genome Assembly Tutorial | ONT reads | FLYE | Bioinformatics for Beginners.
Taught by
Bioinformatics Coach
