This course covers the learning outcomes and goals of analyzing whole genome sequences, including identifying antimicrobial resistance genes, building phylogenetic trees, genome assembly using ONT reads, and variant calling using Snippy. The course teaches the individual skills of comparative genomics, using Abricate, FLYE, and microbial bioinformatics tools. The teaching method involves tutorials and hands-on practice suitable for beginners in bioinformatics. The intended audience for this course includes individuals interested in bioinformatics, microbial genomics, and genome analysis.
Overview
Syllabus
A bioinformatics tutorial on Bacterial Genome Analysis | Comparative Genomics.
A bioinformatics tutorial on how to identify Antimicrobial Resistance Genes | Abricate | Beginners.
Build Phylogenetic Trees based on Gene Sequences.
Genome Assembly Tutorial | ONT reads | FLYE | Bioinformatics for Beginners.
Variant Calling using Snippy | Microbial Bioinformatics | Bioinformatics for Beginners | Course.
Taught by
Bioinformatics Coach
