High Throughput Sequencing

High Throughput Sequencing

StatQuest with Josh Starmer via YouTube Direct link

StatQuest: Logs (logarithms), clearly explained

19 of 27

19 of 27

StatQuest: Logs (logarithms), clearly explained

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Classroom Contents

High Throughput Sequencing

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  1. 1 StatQuest: A gentle introduction to RNA-seq
  2. 2 StatQuest: A gentle introduction to ChIP-Seq
  3. 3 StatQuest: Principal Component Analysis (PCA), Step-by-Step
  4. 4 StatQuest: PCA in R
  5. 5 StatQuest: PCA in Python
  6. 6 RPKM, FPKM and TPM, Clearly Explained!!!
  7. 7 StatQuest: MDS and PCoA
  8. 8 StatQuest: t-SNE, Clearly Explained
  9. 9 StatQuest: Hierarchical Clustering
  10. 10 Drawing and Interpreting Heatmaps
  11. 11 StatQuest: DESeq2, part 1, Library Normalization
  12. 12 StatQuest: edgeR, part 1, Library Normalization
  13. 13 StatQuest: edgeR and DESeq2, part 2 - Independent Filtering
  14. 14 StatQuest: MDS and PCoA in R
  15. 15 StatQuest: P Values, clearly explained
  16. 16 False Discovery Rates, FDR, clearly explained
  17. 17 Fisher's Exact Test and the Hypergeometric Distribution
  18. 18 StatQuest: RNA-seq - the problem with technical replicates
  19. 19 StatQuest: Logs (logarithms), clearly explained
  20. 20 StatQuest: PCA main ideas in only 5 minutes!!!
  21. 21 Principal Component Analysis (PCA) clearly explained (2015)
  22. 22 StatQuest: Linear Models Pt.1 - Linear Regression
  23. 23 StatQuest: Linear Regression in R
  24. 24 StatQuest: Linear Models Pt.2 - t-tests and ANOVA
  25. 25 StatQuest: Linear Models Pt.3 - Design Matrices (old version)
  26. 26 StatQuest: Linear Models Pt.3 - Design Matrix Examples in R
  27. 27 StatQuest: K-means clustering

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